Stem-loop cin-mir-4168

Accession

MI0015723

Description

Ciona intestinalis cin-mir-4168 precursor miRNA

Sequence

acugguuaagaaaugcgucaauagcuggaaaagaacccaucuuguuaaagaaagUGGACGAAUUGAUUUAGU
.(((((((.((......))..)))))))........(((.(((........))))))...............

Structure

acugguuaagaaaugcgucaauagcuggaaaagaac   u   guu 
                                    cca cuu   a
                                    ||| |||    
                                    GGU gaa   a
---------------------UGAUUUAGUUAAGCA   -   aga 

Annotation confidence Not enough data

Genome context

1p: 4784070-4784141 [-]

Mature cin-miR-4168-3p

• Accession: MIMAT0016776
• Description: Ciona intestinalis cin-miR-4168-3p mature miRNA
• Sequence: 55 - UGGACGAAUUGAUUUAGU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20370911
   miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
   Hendrix D, Levine M, Shi W
   Genome Biol (2010) 11:R39