miRBase entry: cin-mir-4170

Stem-loop cin-mir-4170


Accession
MI0015725
Description
Ciona intestinalis cin-mir-4170 precursor miRNA


Sequence

UGGAAUUGGUGAUUGGCUGauaaacgaccauguuaccuuuguacag
((..(..(((((((((.((.....)).))).))))))..)...)).

Structure
-  -GA UU      -   C  a 
 UG   A  GGUGAU UGG UG u
 ||   |  |||||| ||| || a
 ac   u  ccauug acc gc a
g  aug uu      u   a  a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cin-miR-4170-5p

Accession MIMAT0016778
Description Ciona intestinalis cin-miR-4170-5p mature miRNA
Sequence 1 - UGGAAUUGGUGAUUGGCUG - 19
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39