miRBase entry: cin-mir-4174

Stem-loop cin-mir-4174


Accession
MI0015729
Description
Ciona intestinalis cin-mir-4174 precursor miRNA


Sequence

cucgcaaaaauuuaaacuauguuucgagUCAAAUUUUUGCCGGAAAA
((.((((((((((..(((........))).)))))))))).))....

Structure
----  c          aa   aug 
    cu gcaaaaauuu  acu   u
    || ||||||||||  |||    
    GG CGUUUUUAAA  Uga   u
AAAA  C          -C   gcu 


Annotation confidence Not enough data
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Genome context
7q: 5184735-5184781 [-]

Database links

Mature cin-miR-4174-3p

Accession MIMAT0016783
Description Ciona intestinalis cin-miR-4174-3p mature miRNA
Sequence 29 - UCAAAUUUUUGCCGGAAAA - 47
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39