Stem-loop cin-mir-4174

Accession

MI0015729

Description

Ciona intestinalis cin-mir-4174 precursor miRNA

Sequence

cucgcaaaaauuuaaacuauguuucgagUCAAAUUUUUGCCGGAAAA
((.((((((((((..(((........))).)))))))))).))....

Structure

----  c          aa   aug 
    cu gcaaaaauuu  acu   u
    || ||||||||||  |||    
    GG CGUUUUUAAA  Uga   u
AAAA  C          -C   gcu 

Annotation confidence Not enough data

Genome context

7q: 5184735-5184781 [-]

Mature cin-miR-4174-3p

• Accession: MIMAT0016783
• Description: Ciona intestinalis cin-miR-4174-3p mature miRNA
• Sequence: 29 - UCAAAUUUUUGCCGGAAAA - 47
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20370911
   miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
   Hendrix D, Levine M, Shi W
   Genome Biol (2010) 11:R39