Stem-loop cin-mir-4181

Accession

MI0015737

Description

Ciona intestinalis cin-mir-4181 precursor miRNA

Sequence

1 reads, 1 reads per million, 1 experiments

AUUGUGUCAGCCUGUCGUUCUagaaauuaGAACGUCAGGCUGACACAAU
((((((((((((((.(((((((.....))))))).))))))))))))))

Structure

              U       g 
AUUGUGUCAGCCUG CGUUCUa a
|||||||||||||| ||||||| a
UAACACAGUCGGAC GCAAGau a
              U       u 

Annotation confidence Not enough data

Genome context

3q: 3055652-3055700 [+]

Mature cin-miR-4181-5p

• Accession: MIMAT0016794
• Description: Ciona intestinalis cin-miR-4181-5p mature miRNA
• Sequence: 1 - AUUGUGUCAGCCUGUCGUUCU - 21
• Evidence: experimental ; Illumina [1]

Mature cin-miR-4181-3p

• Accession: MIMAT0016795
• Description: Ciona intestinalis cin-miR-4181-3p mature miRNA
• Sequence: 30 - GAACGUCAGGCUGACACAAU - 49
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20370911
   miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
   Hendrix D, Levine M, Shi W
   Genome Biol (2010) 11:R39