miRBase entry: cin-mir-4184

Stem-loop cin-mir-4184


Accession
MI0015740
Description
Ciona intestinalis cin-mir-4184 precursor miRNA


Sequence

uugauuaagucgcgauaauaucggaacacuugcauguccuggugggaucguauggAUAUUUAAGAUGGAAUAA
........((((((((..((((((.(((......))).))))))..)))))...)))................

Structure
--------uugauuaa   ---     aa      a   cu 
                guc   gcgau  uaucgg aca  u
                |||   |||||  |||||| |||   
                UAg   ugcua  gugguc ugu  g
AAUAAGGUAGAAUUUA   gua     gg      c   ac 


Annotation confidence Not enough data
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Genome context
14q: 3139392-3139464 [+]

Database links

Mature cin-miR-4184-3p

Accession MIMAT0016800
Description Ciona intestinalis cin-miR-4184-3p mature miRNA
Sequence 56 - AUAUUUAAGAUGGAAUAA - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39