Stem-loop cin-mir-4188

Accession

MI0015745

Description

Ciona intestinalis cin-mir-4188 precursor miRNA

Sequence

UCAAAUGCAAUUUUUAUAcauuugccaaccuuauacauguuguagacuuauaaguuguauuaaa
...((((((((..(((((..(((((.(((.........))))))))..)))))))))))))...

Structure

UCA        UU     ca     c   cuu 
   AAUGCAAU  UUAUA  uuugc aac   a
   ||||||||  |||||  ||||| |||   u
   uuauguug  aauau  agaug uug   a
aaa        --     uc     -   uac 

Annotation confidence Not enough data

Genome context

Unknown

Mature cin-miR-4188-5p

• Accession: MIMAT0016806
• Description: Ciona intestinalis cin-miR-4188-5p mature miRNA
• Sequence: 1 - UCAAAUGCAAUUUUUAUA - 18
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20370911
   miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
   Hendrix D, Levine M, Shi W
   Genome Biol (2010) 11:R39