miRBase entry: cin-mir-4193

Stem-loop cin-mir-4193


Accession
MI0015750
Description
Ciona intestinalis cin-mir-4193 precursor miRNA


Sequence

AUGUUUAACAAGUGUCUUUaugaugucacaggcaaaugucaagcgcacaagaguuagcuugucuau
..((((.(((..(((((...((....)).)))))..))).))))..(((((......)))))....

Structure
--------------------AU    A   AG     UUa  a 
                      GUUU ACA  UGUCU   ug u
                      |||| |||  |||||   ||  
                      cgaa ugu  acgga   ac g
uaucuguucgauugagaacacg    c   aa     --c  u 


Annotation confidence Not enough data
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Genome context
12p: 1425615-1425680 [-]

Database links

Mature cin-miR-4193-5p

Accession MIMAT0016811
Description Ciona intestinalis cin-miR-4193-5p mature miRNA
Sequence 1 - AUGUUUAACAAGUGUCUUU - 19
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39