Stem-loop cin-mir-4195

Accession

MI0015752

Description

Ciona intestinalis cin-mir-4195 precursor miRNA

Sequence

gucacuuauuaucuguauauacaauagccuagcuuaUACAUGUAAUACAUUGGCUU
((((..((((((.((((((......(((...))))))))).))))))...))))..

Structure

--    -cu      c      uacaau   c 
  guca   uauuau uguaua      agc  
  ||||   |||||| ||||||      ||| u
  CGGU   AUAAUG ACAUau      ucg  
UU    UAC      U      ------   a 

Annotation confidence Not enough data

Genome context

13q: 1466427-1466482 [+]

Mature cin-miR-4195-3p

• Accession: MIMAT0016814
• Description: Ciona intestinalis cin-miR-4195-3p mature miRNA
• Sequence: 37 - UACAUGUAAUACAUUGGCUU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20370911
   miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
   Hendrix D, Levine M, Shi W
   Genome Biol (2010) 11:R39