Stem-loop cin-mir-4198

Accession

MI0015755

Description

Ciona intestinalis cin-mir-4198 precursor miRNA

Sequence

AAUGAUGUUAUUUUAAUGaaaucugacauauauuuacccuuuugcuucagggaaauagcauuugu
...(((((((((((..((((.........................))))..)))))))))))...

Structure

AAU           AA    aucugacauau 
   GAUGUUAUUUU  UGaa           a
   |||||||||||  ||||           u
   uuacgauaaag  acuu           u
ugu           gg    cguuuucccau 

Annotation confidence Not enough data

Genome context

scaffold_55: 489332-489396 [+]

Mature cin-miR-4198-5p

• Accession: MIMAT0016817
• Description: Ciona intestinalis cin-miR-4198-5p mature miRNA
• Sequence: 1 - AAUGAUGUUAUUUUAAUG - 18
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20370911
   miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
   Hendrix D, Levine M, Shi W
   Genome Biol (2010) 11:R39