Stem-loop cin-mir-4203

Accession

MI0015760

Description

Ciona intestinalis cin-mir-4203 precursor miRNA

Sequence

3 reads, 1 reads per million, 2 experiments

uuuaaguucuacagcagugguucuuaaacuuucugggguuuUAAACAAUGCUUGGAUCUUGG
..((((.((((.((((...(((...((((((....))))))..)))..)))))))).)))).

Structure

uu    u    c    gug   cuu      u 
  uaag ucua agca   guu   aaacuu c
  |||| |||| ||||   |||   ||||||  
  GUUC AGGU UCGU   CAA   uuuggg u
-G    U    -    -AA   -AU      g 

Annotation confidence Not enough data

Genome context

1q: 5581142-5581203 [-]

Mature cin-miR-4203-3p

• Accession: MIMAT0016823
• Description: Ciona intestinalis cin-miR-4203-3p mature miRNA
• Sequence: 42 - UAAACAAUGCUUGGAUCUUGG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20370911
   miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
   Hendrix D, Levine M, Shi W
   Genome Biol (2010) 11:R39