Stem-loop cin-mir-4204

Accession

MI0015761

Description

Ciona intestinalis cin-mir-4204 precursor miRNA

Sequence

1 reads, 1 reads per million, 1 experiments

UAAAUAUAAUGUCAUUUAUACAUuauuuaugcaaUAAAUGAUUUAUAUUUACAG
(((((((((.(((((((((.(((.....)))..))))))))))))))))))...

Structure

---         U         -A   u 
   UAAAUAUAA GUCAUUUAU  CAU a
   ||||||||| |||||||||  ||| u
   AUUUAUAUU UAGUAAAUa  gua u
GAC         -         ac   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature cin-miR-4204-5p

• Accession: MIMAT0016824
• Description: Ciona intestinalis cin-miR-4204-5p mature miRNA
• Sequence: 1 - UAAAUAUAAUGUCAUUUAUACAU - 23
• Evidence: experimental ; Illumina [1]

Mature cin-miR-4204-3p

• Accession: MIMAT0016825
• Description: Ciona intestinalis cin-miR-4204-3p mature miRNA
• Sequence: 35 - UAAAUGAUUUAUAUUUACAG - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20370911
   miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
   Hendrix D, Levine M, Shi W
   Genome Biol (2010) 11:R39