miRBase entry: cin-mir-4205

Stem-loop cin-mir-4205


Accession
MI0015762
Description
Ciona intestinalis cin-mir-4205 precursor miRNA


Sequence

CGGUUUAAUUGGAUGGAAaauaugagcgucucgucugguugucccg
(((..((((((((((((...........)).))))))))))..)))

Structure
   UU          -  Aaau 
CGG  UAAUUGGAUG GA    a
|||  |||||||||| ||    u
gcc  guuggucugc cu    g
   cu          u  gcga 


Annotation confidence Not enough data
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Genome context
4q: 4932469-4932514 [+]

Database links

Mature cin-miR-4205-5p

Accession MIMAT0016826
Description Ciona intestinalis cin-miR-4205-5p mature miRNA
Sequence 1 - CGGUUUAAUUGGAUGGAA - 18
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39