Stem-loop cin-mir-4206

Accession

MI0015763

Description

Ciona intestinalis cin-mir-4206 precursor miRNA

Sequence

2 reads, 2 reads per million, 1 experiments

ccuaggcuacgcauuuaaugaguaaauuuauucuuuuacuauAUUGAAUAGUUUAGUGAG
.((((((((....(((((((((((((........)))))).)))))))))))))))....

Structure

---c        cgca       -      uuu 
    cuaggcua    uuuaaug aguaaa   a
    ||||||||    ||||||| ||||||    
    GAUUUGAU    AAGUUAu ucauuu   u
GAGU        ----       a      ucu 

Annotation confidence Not enough data

Genome context

scaffold_543: 36648-36707 [-]

Mature cin-miR-4206-3p

• Accession: MIMAT0016827
• Description: Ciona intestinalis cin-miR-4206-3p mature miRNA
• Sequence: 43 - AUUGAAUAGUUUAGUGAG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20370911
   miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
   Hendrix D, Levine M, Shi W
   Genome Biol (2010) 11:R39