Stem-loop cin-mir-4208

Accession

MI0015765

Description

Ciona intestinalis cin-mir-4208 precursor miRNA

Sequence

uuuaaauaacaugaucuuugcuaucguuuuuuaaaaaaaagauaaauaaaaaUGAUGUUAUUUUAGGUUU
...(((((((((.((.((((.((((.(((((....)))))))))..)))).)).))))))))).......

Structure

----uuu         g  c    -c    g     u 
       aaauaacau au uuug  uauc uuuuu a
       ||||||||| || ||||  |||| |||||  
       UUUAUUGUA Ua aaau  auag aaaaa a
UUUGGAU         G  a    aa    -     a 

Annotation confidence Not enough data

Genome context

1q: 4390830-4390899 [-]

Mature cin-miR-4208-3p

• Accession: MIMAT0016829
• Description: Ciona intestinalis cin-miR-4208-3p mature miRNA
• Sequence: 53 - UGAUGUUAUUUUAGGUUU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20370911
   miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
   Hendrix D, Levine M, Shi W
   Genome Biol (2010) 11:R39