Stem-loop aly-MIR395i

Accession

MI0015778

Description

Arabidopsis lyrata aly-MIR395i precursor miRNA

Sequence

cucaagaguuccuccgaacacuucauugaaaaaagguucuccauuuucguaauuuuuuuuuaCUGAAGUGUUUGGAGGAACUCcagaugauau
.((..((((((((((((((((((((.(((((((((((((.........).)))))))))))).))))))))))))))))))))..))......

Structure

-----c  aa                    u            - ucc 
      uc  gaguuccuccgaacacuuca ugaaaaaagguu c   a
      ||  |||||||||||||||||||| |||||||||||| |   u
      ag  CUCAAGGAGGUUUGUGAAGU auuuuuuuuuaa g   u
uauagu  ac                    C            u cuu 

Annotation confidence Not enough data

Genome context

GL348713.1: 10978703-10978795 [+]

Mature aly-miR395i

• Accession: MIMAT0017905
• Description: Arabidopsis lyrata aly-miR395i mature miRNA
• Sequence: 63 - CUGAAGUGUUUGGAGGAACUC - 83
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 20407023
   Arabidopsis lyrata small RNAs: transient MIRNA and small interfering RNA loci within the Arabidopsis genus
   "Ma Z, Coruh C, Axtell MJ"
   "Plant Cell (2010) 22:1090-1103