Accession
MI0015780
Description
Arabidopsis lyrata
aly-MIR841 precursor miRNA
Sequence
241
reads,
34.0
reads per million, 10 experiments
gcaccaacucuaccaugugcagaaacuauggucUUGAGUUGCCUGUGAAUACGAcccacuggaaacuaaaauaaacaaagaaacaguaucagugugaaauuucauaaaauuagaguacaaagagacaugaaauuucuuuguuuacuucaguuuuugaugggucgUAUUCACAUGCAACUCAGGACCAGaguaucuacacauggucgacuuggug
.((((((.((.((((((((.(((.(((.((((((((((((((.(((((((((((((((.((((((((.((.((((((((((((((((.((..((((....(((.........)))))))..)).)).))...)))))))))))).)).)))))))).))))))))))))))).)))))))))))))).))).))).)))))))).)).))))))
.((((((.((.((((((((.(((.(((.((((((((((((((.(((((((((((((((.((((((((.((.((((((((((((((((.((..((((....(((.........)))))))..)).)).))...)))))))))))).)).)))))))).))))))))))))))).)))))))))))))).))).))).)))))))).)).))))))
Structure
g c u c a a C c a a --- - a ag aaau aua caccaa uc accaugug aga acu uggucUUGAGUUGC UGUGAAUACGAccca uggaaacu aa uaaacaaagaaa ca gu uc ugug uuc a |||||| || |||||||| ||| ||| |||||||||||||| ||||||||||||||| |||||||| || |||||||||||| || || || |||| ||| a gugguu ag ugguacac ucu uga ACCAGGACUCAACG ACACUUAUgcugggu guuuuuga uu auuuguuucuuu gu ca ag acau gag a - c c a a G U a c c aaa a g aa ---- auu
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
GL348719.1: 15200291-15200504 [-]
Database links
Mature aly-miR841-5p
| Accession | MIMAT0017907 |
| Description | Arabidopsis lyrata aly-miR841-5p mature miRNA |
| Sequence | 34 - UUGAGUUGCCUGUGAAUACGA - 54 |
| Evidence |
experimental
SOLiD [1] |
Mature aly-miR841-3p
| Accession | MIMAT0057389 |
| Description | Arabidopsis lyrata aly-miR841-3p mature miRNA |
| Sequence | 165 - UAUUCACAUGCAACUCAGGACCAG - 188 |
| Evidence |
experimental
unknown |
References
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