Accession
MI0015790
Description
Arabidopsis lyrata
aly-MIR4229 precursor miRNA
Sequence
1781
reads,
89.0
reads per million, 9 experiments
acauaaaucguccuaaaaccUUGGCAGGGAGGUCCUCCACACacaauauuuacaaggacguuuugcacguugcauucuuugaaauugaugugaauauugugUGUGGAGACAUCUUUGUCAAGGUGuuagaugauuuauauuaa
..((((((((((.(((.(((((((((((((.(((.(((((((((((((((((((..(((((.....))))).................)))))))))))))))))))))).))))))))))))).))))))))))))).....
..((((((((((.(((.(((((((((((((.(((.(((((((((((((((((((..(((((.....))))).................)))))))))))))))))))))).))))))))))))).))))))))))))).....
Structure
---ac c a G C ---------------ag u
auaaaucguc uaa accUUGGCAGGGA GUC UCCACACacaauauuuaca gacgu u
|||||||||| ||| ||||||||||||| ||| ||||||||||||||||||| ||||| u
uauuuaguag auu UGGAACUGUUUCU CAG AGGUGUguguuauaagugu uugca g
aauua - G A - aguuaaaguuucuuacg c
Annotation confidence
High
Do you think this miRNA is real?
Genome context
GL348715.1: 6816117-6816259 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from aly-MIR4229
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature aly-miR4229-5p
| Accession | MIMAT0017917 |
| Description | Arabidopsis lyrata aly-miR4229-5p mature miRNA |
| Sequence | 21 - UUGGCAGGGAGGUCCUCCACAC - 42 |
| Evidence |
experimental
SOLiD [1] |
Mature aly-miR4229-3p
| Accession | MIMAT0057397 |
| Description | Arabidopsis lyrata aly-miR4229-3p mature miRNA |
| Sequence | 102 - UGUGGAGACAUCUUUGUCAAGGUG - 125 |
| Evidence |
experimental
unknown |
References
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