Accession
MI0015791
Description
Arabidopsis lyrata
aly-MIR4230 precursor miRNA
Sequence
9643
reads,
213.0
reads per million, 8 experiments
aauuauuauuauaccucucaUGUCUCGGAAAUUUGCACCCUgugauuaauauauuggaaucauuuuuauugcucacagGGUGCAAACUUUAGAGACUUGaaauguguaauaauaaaaua
..((((((((((((...(((.(((((.(((.((((((((((((((.(((((...((....))....))))).)))))))))))))).))).))))).)))...))))))))))))....
..((((((((((((...(((.(((((.(((.((((((((((((((.(((((...((....))....))))).)))))))))))))).))).))))).)))...))))))))))))....
Structure
--aa cuc U G A u -uau g
uuauuauuauac uca GUCUC GAA UUUGCACCCUguga uaaua ug a
|||||||||||| ||| ||||| ||| |||||||||||||| ||||| ||
aauaauaaugug aGU CAGAG UUU AAACGUGGgacacu guuau ac a
auaa uaa U A C c uuuu u
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
GL348715.1: 6818689-6818807 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from aly-MIR4230
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature aly-miR4230-5p
| Accession | MIMAT0017918 |
| Description | Arabidopsis lyrata aly-miR4230-5p mature miRNA |
| Sequence | 21 - UGUCUCGGAAAUUUGCACCCU - 41 |
| Evidence |
experimental
SOLiD [1] |
Mature aly-miR4230-3p
| Accession | MIMAT0057398 |
| Description | Arabidopsis lyrata aly-miR4230-3p mature miRNA |
| Sequence | 79 - GGUGCAAACUUUAGAGACUUG - 99 |
| Evidence |
experimental
unknown |
References
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