Accession
MI0015797
Description
Arabidopsis lyrata
aly-MIR4235 precursor miRNA
Sequence
1276
reads,
135.0
reads per million, 10 experiments
cuguaguaugugugauuucuggguuguauUGUUUUCAGUUCCUGUUCUGUaagugaauaugaccaauacuuguugguuacacucaagcuguacagaacaggaACUGAAAACACUACAACCCCUagaucuugguacuuuuuacu
....(((((....(((((..((((((((.(((((((((((((((((((((((((((...((((((((....))))))))...))..))).)))))))))))))))))))))).))))))))..)))))...))))).......
....(((((....(((((..((((((((.(((((((((((((((((((((((((((...((((((((....))))))))...))..))).)))))))))))))))))))))).))))))))..)))))...))))).......
Structure
---cugu gugu cu u - -- aua a
aguau gauuu ggguugua UGUUUUCAGUUCCUGUUCUGUa agu ga ugaccaau c
||||| ||||| |||||||| |||||||||||||||||||||| ||| || ||||||||
ucaug cuaga CCCAACAU ACAAAAGUCAaggacaagacau ucg cu auugguug u
ucauuuu -guu UC C g aa cac u
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
GL348717.1: 17278055-17278197 [+]
Database links
Mature aly-miR4235-5p
| Accession | MIMAT0057401 |
| Description | Arabidopsis lyrata aly-miR4235-5p mature miRNA |
| Sequence | 30 - UGUUUUCAGUUCCUGUUCUGU - 50 |
| Evidence |
experimental
unknown |
Mature aly-miR4235-3p
| Accession | MIMAT0017924 |
| Description | Arabidopsis lyrata aly-miR4235-3p mature miRNA |
| Sequence | 103 - ACUGAAAACACUACAACCCCU - 123 |
| Evidence |
experimental
SOLiD [1] |
References
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