Accession
MI0015813
Description
Arabidopsis lyrata
aly-MIR4249 precursor miRNA
Sequence
149
reads,
45.0
reads per million, 7 experiments
uacacauuucuuguucagguugaAUUUGAGAAGUUGAGGUAGGUuuaccaacucuugaauuucucacacucucgaucaaguuucucuuaucgaguuugguuucucaaacCCACCUCAAAUUCUCCAAUUccaccagaaccuuaaaaaucuuua
............((((.(((.(((((.(((((.(((((((.((((((((((....(((.....)))....((((((.(((.....))))))))).))))).....))))).))))))).))))).))))).))).))))..............
............((((.(((.(((((.(((((.(((((((.((((((((((....(((.....)))....((((((.(((.....))))))))).))))).....))))).))))))).))))).))))).))).))))..............
Structure
--uacacauuucuu a u U G A ----- cucuugaauuucucacacu c u
guuc ggu gaAUU GAGAA UUGAGGU GGUuu accaa cucgau aag u
|||| ||| ||||| ||||| ||||||| ||||| ||||| |||||| ||| u
caag cca cUUAA CUCUU AACUCCA Ccaaa ugguu gagcua uuc c
auuucuaaaaauuc a c C A C cucuu ------------------u - u
Annotation confidence
High
Do you think this miRNA is real?
Genome context
GL348714.1: 2250562-2250714 [-]
Database links
Mature aly-miR4249-5p
| Accession | MIMAT0017940 |
| Description | Arabidopsis lyrata aly-miR4249-5p mature miRNA |
| Sequence | 24 - AUUUGAGAAGUUGAGGUAGGU - 44 |
| Evidence |
experimental
SOLiD [1] |
Mature aly-miR4249-3p
| Accession | MIMAT0057413 |
| Description | Arabidopsis lyrata aly-miR4249-3p mature miRNA |
| Sequence | 110 - CCACCUCAAAUUCUCCAAUU - 129 |
| Evidence |
experimental
unknown |
References
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