Accession
MI0015820
Description
Arabidopsis thaliana
ath-MIR4240 precursor miRNA
Sequence
7773
reads,
79.0
reads per million, 83 experiments
cuuucguagccaugaaguuaauggcuagagUGACUAGACCCGUAACAUUACcauauaucauuugaacugaaauuuguuuguucugaggauuauuuuucaagauaucaaaacgaagauaaguggcugcacaaacuuuuuuuagcgaauauaucguUAUGUUAUCGGGUCUAGCACUcuauccacugauuucaugaccacgagccuc
..(((((.(.((((((((((.(((.(((((((.(((((((((((((((.((.((((((...(((..((((((...((((((((((((((....))))).)))((((........)))).........))))))...))))))))))))))).)).)))))).)))))))))))))))).))).)))))))))).).)))))....
..(((((.(.((((((((((.(((.(((((((.(((((((((((((((.((.((((((...(((..((((((...((((((((((((((....))))).)))((((........)))).........))))))...))))))))))))))).)).)))))).)))))))))))))))).))).)))))))))).).)))))....
Structure
--cu a c a c A - U c cau aa uuu ------------------------- - u
uucgu g caugaaguua ugg uagagUG CUAGACCCG UAACAU AC auauau uug cugaaa guuugu ucu gagga u
||||| | |||||||||| ||| ||||||| ||||||||| |||||| || |||||| ||| |||||| |||||| ||| |||||
gagca c guacuuuagu acc aucUCAC GAUCUGGGC AUUGUA ug uauaua agc gauuuu caaaca aga cuuuu a
cucc c a c u - U U c --- -- uuu cgucggugaauagaagcaaaacuau a u
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr4: 10711558-10711762 [-]
Database links
Mature ath-miR4240-5p
| Accession | MIMAT0017948 |
| Description | Arabidopsis thaliana ath-miR4240-5p mature miRNA |
| Sequence | 31 - UGACUAGACCCGUAACAUUAC - 51 |
| Evidence |
experimental
SOLiD [1], Illumina [2] |
Mature ath-miR4240-3p
| Accession | MIMAT0053898 |
| Description | Arabidopsis thaliana ath-miR4240-3p mature miRNA |
| Sequence | 155 - UAUGUUAUCGGGUCUAGCACU - 175 |
| Evidence |
experimental
unknown |
References
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