Accession
MI0015821
Description
Arabidopsis thaliana
ath-MIR4243 precursor miRNA
Sequence
3261
reads,
26.0
reads per million, 103 experiments
aaagaaccgugaauuacagUUGAAAUUGUAGAUUUCGUACaugacaauaauuugcucgagcaucacuuucaugauuuuguggucuguguugccguauuugagagcauacauuucauguUCGAAAUCUACGAUUUUAACUcuaauuuuuggaugguucuuuauuucaauuacagagggau
((((((((((((((((.((((((((((((((((((((.((((((.(((....(((((..(((.(((..((((......))))...))).))).........)))))...))))))))).)))))))))))))))))))).))))))....))))))))))...................
((((((((((((((((.((((((((((((((((((((.((((((.(((....(((((..(((.(((..((((......))))...))).))).........)))))...))))))))).)))))))))))))))))))).))))))....))))))))))...................
Structure
------------------- ---- c U c aauu -------ga u -uu ga
aaagaaccgu gaauua agUUGAAAUUGUAGAUUUCG ACauga aau ugcuc gca cac ucau u
|||||||||| |||||| |||||||||||||||||||| |||||| ||| ||||| ||| ||| ||||
uuucuuggua uuuaau UCAAUUUUAGCAUCUAAAGC uguacu uua acgag cgu gug ggug u
uagggagacauuaacuuua gguu c U - -cau aguuuaugc u ucu uu
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr5: 19567208-19567386 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ath-MIR4243
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ath-miR4243-5p
| Accession | MIMAT0017949 |
| Description | Arabidopsis thaliana ath-miR4243-5p mature miRNA |
| Sequence | 20 - UUGAAAUUGUAGAUUUCGUAC - 40 |
| Evidence |
experimental
SOLiD [1] |
Mature ath-miR4243-3p
| Accession | MIMAT0053899 |
| Description | Arabidopsis thaliana ath-miR4243-3p mature miRNA |
| Sequence | 119 - UCGAAAUCUACGAUUUUAACU - 139 |
| Evidence |
experimental
unknown |
References
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