Stem-loop ssc-mir-382

Accession

MI0015911

Description

Sus scrofa ssc-mir-382 precursor miRNA

Literature search

10 open access papers mention ssc-mir-382
(11 sentences)

Sequence

93575 reads, 181.0 reads per million, 161 experiments

acuugaagagAAGUUGUUCGUGGUGGAUUCGcuuuacuuaugacgAAUCAUUCACGGACAACACUUUuuucaguacc
..(((((((((.(((((((((((..(((((((.........).))))))..)))))))))))..)))))))))....

Structure

--ac         -A           UG      - uuu 
    uugaagagA  GUUGUUCGUGG  GAUUCG c   a
    |||||||||  |||||||||||  |||||| |   c
    gacuuuUUU  CAACAGGCACU  CUAAgc g   u
ccau         CA           UA      a uau 

Annotation confidence High

Genome context

Unknown

Mature ssc-miR-382-5p

• Accession: MIMAT0017956
• Description: Sus scrofa ssc-miR-382-5p mature miRNA
• Sequence: 11 - AAGUUGUUCGUGGUGGAUUCG - 31
• Evidence: experimental ; Illumina [1-2]

Mature ssc-miR-382-3p

• Accession: MIMAT0052654
• Description: Sus scrofa ssc-miR-382-3p mature miRNA
• Sequence: 46 - AAUCAUUCACGGACAACACUUU - 67
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20433717
   Deciphering the porcine intestinal microRNA transcriptome
   Sharbati S, Friedländer MR, Sharbati J, Hoeke L, Chen W, Keller A, Stähler PF, Rajewsky N, Einspanier R
   BMC Genomics (2010) 11:275


2. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100