Stem-loop ssc-mir-4332

Accession

MI0015917

Description

Sus scrofa ssc-mir-4332 precursor miRNA

Literature search

3 open access papers mention ssc-mir-4332
(10 sentences)

Sequence

229288 reads, 586.0 reads per million, 205 experiments

cggcgggggGUGUCGCGGGGGUGGGCGGGCuggggccggggguggggccggcgggggcacgacccccggucggcgucCACGGCCGCCGCCGGGCGCCuuuccaccgc
(((.((((((((((.(((.(((((.((((.((.((((((((((.(.(((......))).).))))))))))..)).)).)).))))).))))))))).)))).))).

Structure

-   c    -      G   G     G  -  C  -g          g g   gg 
 cgg gggg gGUGUC CGG GGUGG CG GG ug  ggccgggggu g gcc  c
 ||| |||| |||||| ||| ||||| || || ||  |||||||||| | |||   
 gcc ccuu CCGCGG GCC CCGCC GC Cc gc  cuggccccca c cgg  g
c   a    u      -   G     G  A  u  gg          g a   gg 

Annotation confidence Medium

Genome context

Unknown

Mature ssc-miR-4332-5p

• Accession: MIMAT0052657
• Description: Sus scrofa ssc-miR-4332-5p mature miRNA
• Sequence: 10 - GUGUCGCGGGGGUGGGCGGGC - 30
• Evidence: experimental ; Illumina [1-2]

Mature ssc-miR-4332-3p

• Accession: MIMAT0017962
• Description: Sus scrofa ssc-miR-4332-3p mature miRNA
• Sequence: 78 - CACGGCCGCCGCCGGGCGCC - 97
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20433717
   Deciphering the porcine intestinal microRNA transcriptome
   Sharbati S, Friedländer MR, Sharbati J, Hoeke L, Chen W, Keller A, Stähler PF, Rajewsky N, Einspanier R
   BMC Genomics (2010) 11:275


2. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100