miRBase entry: ssc-mir-4335

Stem-loop ssc-mir-4335


Accession
MI0015923
Description
Sus scrofa ssc-mir-4335 precursor miRNA

Literature search
3 open access papers mention ssc-mir-4335
(6 sentences)

Sequence

55 reads, 53 reads per million, 11 experiments
ccucuuccagccccacguugggcgccacucugcuGUGCCCAGCGCUGCAGGGCAauagggaagc
...(((((.((((((((((((((((.........)))))))))).))..)))).....))))).

Structure
ccu     ----a    --  -          cac 
   cuucc     gccc  ca cguugggcgc   u
   |||||     ||||  || ||||||||||   c
   gaagg     CGGG  GU GCGACCCGUG   u
--c     gauaA    AC  C          ucg 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssc-miR-4335

Accession MIMAT0017968
Description Sus scrofa ssc-miR-4335 mature miRNA
Sequence 35 - GUGCCCAGCGCUGCAGGGCA - 54
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20433717
    Deciphering the porcine intestinal microRNA transcriptome
    Sharbati S, Friedländer MR, Sharbati J, Hoeke L, Chen W, Keller A, Stähler PF, Rajewsky N, Einspanier R
    BMC Genomics (2010) 11:275