Stem-loop ssc-mir-383

Accession

MI0015927

Description

Sus scrofa ssc-mir-383 precursor miRNA

Sequence

1 reads, 4 reads per million, 1 experiments

ccugcuccucagaucagaaggugauuguggcuuuggguagauauuaaucagCCACAGCACUGCCUGGUCAGAaagagcaagu
..(((((.((.((((((..((((.((((((((...(((........)))))))))))))))..)))))).))..)))))...

Structure

-cc     -c  a      aa    a        uug   aga 
   ugcuc  uc gaucag  ggug uuguggcu   ggu   u
   |||||  || ||||||  |||| ||||||||   |||    
   acgag  AG CUGGUC  UCAC GACACCga   cua   a
uga     aa  A      CG    -        ---   auu 

Annotation confidence Not enough data

Genome context

chr17: 2603744-2603825 [-]

Mature ssc-miR-383

• Accession: MIMAT0017972
• Description: Sus scrofa ssc-miR-383 mature miRNA
• Sequence: 52 - CCACAGCACUGCCUGGUCAGA - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20433717
   Deciphering the porcine intestinal microRNA transcriptome
   Sharbati S, Friedländer MR, Sharbati J, Hoeke L, Chen W, Keller A, Stähler PF, Rajewsky N, Einspanier R
   BMC Genomics (2010) 11:275