Stem-loop ssc-mir-484

Accession

MI0015929

Description

Sus scrofa ssc-mir-484 precursor miRNA

Literature search

2 open access papers mention ssc-mir-484
(2 sentences)

Sequence

4 reads, 10 reads per million, 4 experiments

gcagccaucgucaggcucaguccccucccgauaaaccccuaaauagggaccuuCCCAGGGGGCGACCCAGGCUuuuuuggcaa
...((((..(((.((.((.(((((((...((.....((((....))))....))..))))))))).)).))).....))))..

Structure

gca    ---uc   a  c  a       ccc  uaaac    a 
   gcca     guc gg uc guccccu   ga     cccu a
   ||||     ||| || || |||||||   ||     ||||  
   cggu     CGG CC AG CGGGGGA   Cu     ggga a
-aa    uuuuU   A  C  -       -CC  -ucca    u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssc-miR-484

• Accession: MIMAT0017974
• Description: Sus scrofa ssc-miR-484 mature miRNA
• Sequence: 54 - CCCAGGGGGCGACCCAGGCU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20433717
   Deciphering the porcine intestinal microRNA transcriptome
   Sharbati S, Friedländer MR, Sharbati J, Hoeke L, Chen W, Keller A, Stähler PF, Rajewsky N, Einspanier R
   BMC Genomics (2010) 11:275