Stem-loop ssc-mir-4337

Accession

MI0015932

Description

Sus scrofa ssc-mir-4337 precursor miRNA

Sequence

2727 reads, 2.0 reads per million, 166 experiments

ggcacuagacAGGGUAUAUAAGCCUUCACUGGuuaaaucaacauacAGUGAAGGCUUAUAUAUCUUGUcuagugccca
(((((((((((((((((((((((((((((((..(........)..)))))))))))))))))))))))))))))))..

Structure

--                               Gu aaa 
  ggcacuagacAGGGUAUAUAAGCCUUCACUG  u   u
  |||||||||||||||||||||||||||||||  |    
  ccgugaucUGUUCUAUAUAUUCGGAAGUGAc  a   c
ac                               au caa 

Annotation confidence Medium

Genome context

chr18: 16110017-16110094 [-]

Mature ssc-miR-4337-5p

• Accession: MIMAT0017977
• Description: Sus scrofa ssc-miR-4337-5p mature miRNA
• Sequence: 11 - AGGGUAUAUAAGCCUUCACUGG - 32
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-4337-3p

• Accession: MIMAT0052662
• Description: Sus scrofa ssc-miR-4337-3p mature miRNA
• Sequence: 47 - AGUGAAGGCUUAUAUAUCUUGU - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20433717
   Deciphering the porcine intestinal microRNA transcriptome
   Sharbati S, Friedländer MR, Sharbati J, Hoeke L, Chen W, Keller A, Stähler PF, Rajewsky N, Einspanier R
   BMC Genomics (2010) 11:275