Stem-loop hsa-mir-3688-1

Accession

MI0016089

Symbol

HGNC: MIR3688-1

Description

Homo sapiens hsa-mir-3688-1 precursor miRNA mir-3688

Gene
family

RF04161; mir-3688

Sequence

359 reads, 1524 reads per million, 59 experiments

ucuucacuuucaagAGUGGCAAAGUCUUUCCAUAUguauguauguaugucuguuacacaUAUGGAAAGACUUUGCCACUCUuuaaagugaaga
((((((((((.((((((((((((((((((((((((((..(((...........))))))))))))))))))))))))))))).))))))))))

Structure

          c                          au   ugua 
ucuucacuuu aagAGUGGCAAAGUCUUUCCAUAUgu  gua    u
|||||||||| ||||||||||||||||||||||||||  |||    g
agaagugaaa uUCUCACCGUUUCAGAAAGGUAUaca  cau    u
          u                          --   uguc 

Annotation confidence High

Genome context

chr4: 159128802-159128894 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from hsa-mir-3688-1

Disease association

hsa-mir-3688-1 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-3688-3p

• Accession: MIMAT0018116
• Description: Homo sapiens hsa-miR-3688-3p mature miRNA
• Sequence: 60 - UAUGGAAAGACUUUGCCACUCU - 81
• Evidence: experimental ; Illumina [1]

Mature hsa-miR-3688-5p

• Accession: MIMAT0019223
• Description: Homo sapiens hsa-miR-3688-5p mature miRNA
• Sequence: 15 - AGUGGCAAAGUCUUUCCAUAU - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20459673
   Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood
   Vaz C, Ahmad HM, Sharma P, Gupta R, Kumar L, Kulshreshtha R, Bhattacharya A
   BMC Genomics (2010) 11:288


2. PubMed ID: 21199797
   Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
   "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
   "Cancer Res (2011) 71:78-86