Stem-loop pab-MIR3697b

Accession

MI0016099

Description

Picea abies pab-MIR3697b precursor miRNA

Sequence

32312 reads, 1646.0 reads per million, 102 experiments

agaaggcgcgauuaauaauggUAGCCCCUGACUUCAACAUGAGgaagagaagcagcuccucuuCGUGUUGAAGUCAGGUCUAUCauugcaucc
.........(((...(((((((((..(((((((((((((((((((.(((......))).))))))))))))))))))).))))))))).))).

Structure

agaaggcgc   uaa         CC                   a   aa 
         gau   uaauggUAG  CCUGACUUCAACAUGAGga gag  g
         |||   |||||||||  ||||||||||||||||||| |||   
         cua   guuaCUAUC  GGACUGAAGUUGUGCuucu cuc  c
--------c   --c         -U                   c   ga 

Annotation confidence High

Genome context

MA_5242338: 171-263 [+]

Mature pab-miR3697b-5p

• Accession: MIMAT0018129
• Description: Picea abies pab-miR3697b-5p mature miRNA
• Sequence: 22 - UAGCCCCUGACUUCAACAUGAG - 43
• Evidence: experimental ; cloned [1]

Mature pab-miR3697b-3p

• Accession: MIMAT0057418
• Description: Picea abies pab-miR3697b-3p mature miRNA
• Sequence: 64 - CGUGUUGAAGUCAGGUCUAUC - 84
• Evidence: experimental ; unknown

References

1. PubMed ID: 20561211
   MicroRNAs, the epigenetic memory and climatic adaptation in Norway spruce
   "Yakovlev IA, Fossdal CG, Johnsen O"
   "New Phytol (2010) 187:1154-1169