Stem-loop pab-MIR3698

Accession

MI0016100

Description

Picea abies pab-MIR3698 precursor miRNA

Sequence

ucuggcuguaCUUGCAACUCUGCCUUGGCUUAugggagacgcucucugccuuagcuuauagcacacugccauaggcaaaguagaguugcaaguccagcaaga
(((.((((.((((((((((((((....((((((((.((..(((....((....))....)))...)).))))))))...)))))))))))))).)))).)))

Structure

   g    u              CUUG        g  -ac   cucu  c 
ucu gcug aCUUGCAACUCUGC    GCUUAugg ag   gcu    gc u
||| |||| ||||||||||||||    |||||||| ||   |||    ||  
aga cgac ugaacguugagaug    cggauacc uc   cga    cg u
   a    c              -aaa        g  aca   uauu  a 

Annotation confidence Not enough data

Genome context

MA_916243: 6357-6458 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pab-MIR3698

Mature pab-miR3698

• Accession: MIMAT0018130
• Description: Picea abies pab-miR3698 mature miRNA
• Sequence: 11 - CUUGCAACUCUGCCUUGGCUUA - 32
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 20561211
   MicroRNAs, the epigenetic memory and climatic adaptation in Norway spruce
   "Yakovlev IA, Fossdal CG, Johnsen O"
   "New Phytol (2010) 187:1154-1169