Stem-loop pab-MIR3712

Accession

MI0016115

Description

Picea abies pab-MIR3712 precursor miRNA

Literature search

1 open access papers mention pab-MIR3712
(1 sentences)

Sequence

377286 reads, 12294.0 reads per million, 102 experiments

gagaUGUGAUCAAGAUCAGACUACCAaauccuacagcauuugaggucucuACUUGCUCAAUAUCAUCCA
..(((((((.((((...(((((..(((((........))))).)))))...)))).)).))))).....

Structure

---ga     -  U    AUC     AC     ccu 
     gaUGU GA CAAG   AGACU  CAaau   a
     ||||| || ||||   |||||  |||||    
     CUAUA CU GUUC   ucugg  guuua   c
ACCUA     A  C    Auc     -a     cga 

Annotation confidence Medium

Genome context

MA_10254503: 278-346 [-]

Mature pab-miR3712-5p

• Accession: MIMAT0018145
• Description: Picea abies pab-miR3712-5p mature miRNA
• Sequence: 5 - UGUGAUCAAGAUCAGACUACCA - 26
• Evidence: experimental ; cloned [1]

Mature pab-miR3712-3p

• Accession: MIMAT0057430
• Description: Picea abies pab-miR3712-3p mature miRNA
• Sequence: 51 - ACUUGCUCAAUAUCAUCCA - 69
• Evidence: experimental ; unknown

References

1. PubMed ID: 20561211
   MicroRNAs, the epigenetic memory and climatic adaptation in Norway spruce
   "Yakovlev IA, Fossdal CG, Johnsen O"
   "New Phytol (2010) 187:1154-1169