Stem-loop pab-MIR160a

Accession

MI0016116

Description

Picea abies pab-MIR160a precursor miRNA

Literature search

1 open access papers mention pab-MIR160a
(1 sentences)

Sequence

aaagguugaugugUGCCUGGCUCCCUGUAUGCCAcauacaaggcccagucauauguugauuggcuucauagguggcuuacaaggagccaagcauacguuuucuuac
..(((..(((((((((.(((((((.((((.(((((.((..(((((.(((((.....))))))))))..)).))))).)))).))))))).)))))))))..)))..

Structure

aa   uu         C       C    U     a  ca     c     u 
  agg  gaugugUGC UGGCUCC UGUA GCCAc ua  aggcc aguca a
  |||  ||||||||| ||||||| |||| ||||| ||  ||||| ||||| u
  uuc  uugcauacg accgagg acau cggug au  uucgg uuagu g
ca   uu         a       a    u     g  ac     -     u 

Annotation confidence Not enough data

Genome context

MA_10961: 17646-17751 [-]

Mature pab-miR160a

• Accession: MIMAT0018146
• Description: Picea abies pab-miR160a mature miRNA
• Sequence: 14 - UGCCUGGCUCCCUGUAUGCCA - 34
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 20561211
   MicroRNAs, the epigenetic memory and climatic adaptation in Norway spruce
   "Yakovlev IA, Fossdal CG, Johnsen O"
   "New Phytol (2010) 187:1154-1169