Stem-loop pab-MIR166b

Accession

MI0016119

Description

Picea abies pab-MIR166b precursor miRNA

Literature search

1 open access papers mention pab-MIR166b
(3 sentences)

Sequence

uuucagaguugggauaucgggaaugaaaccugggucaagaugauuugaaggcaggcuguugaagauuaucUCGGACCAGGCUUCAUUCCUUgcauccaaacucuucaaguacuguugcucaauugaaaa
....((((((.((((...(((((((((.(((((..(.(((((((((...((((...))))..))))))))).)..))))).)))))))))...)))).))))))(((((((....))))....)))...

Structure

---------------------uuuc      g    auc         a     gu a         gaa    g 
                         agaguu ggau   gggaaugaa ccugg  c agaugauuu   ggca  
                         |||||| ||||   ||||||||| |||||  | |||||||||   |||| g
                         ucucaa ccua   UCCUUACUU GGACC  G Ucuauuaga   uugu  
aaaaguuaacucguugucaugaacu      a    cgU         C     AG C         -ag    c 

Annotation confidence Not enough data

Genome context

MA_69761: 2483-2611 [+]

Mature pab-miR166b

• Accession: MIMAT0018149
• Description: Picea abies pab-miR166b mature miRNA
• Sequence: 71 - UCGGACCAGGCUUCAUUCCUU - 91
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 20561211
   MicroRNAs, the epigenetic memory and climatic adaptation in Norway spruce
   "Yakovlev IA, Fossdal CG, Johnsen O"
   "New Phytol (2010) 187:1154-1169