Stem-loop tgu-mir-25

Accession

MI0016246

Description

Taeniopygia guttata tgu-mir-25 precursor miRNA

Literature search

3 open access papers mention tgu-mir-25
(6 sentences)

Sequence

cccgagcaguacaggggacagaaugggggcuguggucaguuCAUUGCACUUGUCUCGGCUACUuguucaucuucguugg
...((((((((...(((((((.....((((((....)))))).......)))))))...))).)))))...........

Structure

--------ccc     -   cag       --aaugg      u 
           gagca gua   gggacag       gggcug g
           ||||| |||   |||||||       ||||||  
           cuugu CAU   CUCUGUU       Cuugac g
gguugcuucua     U   CGG       CACGUUA      u 

Annotation confidence Not enough data

Genome context

chr2: 142309692-142309770 [-]

Mature tgu-miR-25

• Accession: MIMAT0018616
• Description: Taeniopygia guttata tgu-miR-25 mature miRNA
• Sequence: 42 - CAUUGCACUUGUCUCGGCUACU - 63
• Evidence: not_experimental

References

1. PubMed ID: 21627805
   Song exposure regulates known and novel microRNAs in the zebra finch auditory forebrain
   Gunaratne PH, Lin YC, Benham AL, Drnevich J, Coarfa C, Tennakoon JB, Creighton CJ, Kim JH, Milosavljevic A, Watson M, Griffiths-Jones S, Clayton DF
   BMC Genomics (2011) 12:277