miRBase entry: 21627805

Song exposure regulates known and novel microRNAs in the zebra finch auditory forebrain

PubMed ID 21627805
Authors Gunaratne PH, Lin YC, Benham AL, Drnevich J, Coarfa C, Tennakoon JB, Creighton CJ, Kim JH, Milosavljevic A, Watson M, Griffiths-Jones S, Clayton DF
Journal BMC Genomics
Volume 12
Pages 277

There are 81 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
tgu-mir-25 MI0016246 None chr2 142309692 142309770 - -
tgu-mir-192 MI0016247 None chr8 22188980 22189064 + -
tgu-mir-10a MI0016248 None chr7 17079281 17079392 + -
tgu-mir-132 MI0016249 None None None -
hsa-let-7a-1 MI0000060 46519 chr9 94175957 94176036 + High
hsa-let-7a-2 MI0000061 46265 chr11 122146522 122146593 - High
hsa-let-7a-3 MI0000062 46706 chr22 46112749 46112822 + High
hsa-let-7f-1 MI0000067 65280 chr9 94176347 94176433 + High
hsa-let-7f-2 MI0000068 65395 chrX 53557192 53557274 - High
hsa-mir-25 MI0000082 3994 chr7 100093560 100093643 - High
hsa-mir-29a MI0000087 9609 chr7 130876747 130876810 - High
hsa-mir-92a-1 MI0000093 7474 chr13 91351314 91351391 + High
hsa-mir-92a-2 MI0000094 7101 chrX 134169538 134169612 - High
hsa-mir-192 MI0000234 1383 chr11 64891137 64891246 - High
hsa-mir-129-1 MI0000252 320 chr7 128207872 128207943 + High
hsa-mir-219a-1 MI0000296 64 chr6 33207835 33207944 + High
hsa-mir-124-1 MI0000443 922 chr8 9903388 9903472 - High
hsa-mir-124-2 MI0000444 932 chr8 64379149 64379257 + High
hsa-mir-124-3 MI0000445 919 chr20 63178500 63178586 + High
hsa-mir-132 MI0000449 1698 chr17 2049908 2050008 - High
hsa-mir-9-1 MI0000466 2789 chr1 156420341 156420429 - High
hsa-mir-9-2 MI0000467 2776 chr5 88666853 88666939 - High
hsa-mir-9-3 MI0000468 2765 chr15 89368017 89368106 + High
hsa-mir-129-2 MI0000473 302 chr11 43581394 43581483 + High
hsa-mir-134 MI0000474 491 chr14 101054687 101054759 + High
hsa-mir-29c MI0000735 2141 chr1 207801852 207801939 - High
hsa-mir-219a-2 MI0000740 3045 chr9 128392618 128392714 - High
gga-mir-29a MI0001166 670 1 3979177 3979265 + High
gga-let-7a-3 MI0001171 73726 1 71281767 71281842 + High
gga-mir-92-1 MI0001179 1297 1 148016356 148016433 - High
gga-mir-124a-1 MI0001197 1577 2 114006648 114006743 + High
gga-let-7f MI0001233 33796 12 6271298 6271384 - High
gga-let-7a-1 MI0001234 72969 12 6271723 6271812 - High
gga-mir-219a MI0001246 687 17 5623156 5623240 + High
gga-mir-124b MI0001252 7 23 2590021 2590113 + Medium
gga-let-7a-2 MI0001259 72699 24 3398596 3398667 + High
gga-mir-29c MI0001265 663 26 2734711 2734799 - High
gga-mir-9-2 MI0001283 54839 Z 61287830 61287916 + High
hsa-mir-92b MI0003560 954 chr1 155195177 155195272 + High
gga-mir-9-1 MI0003694 55220 28 4054045 4054132 + High
gga-mir-124a-2 MI0008210 1577 20 9034884 9034981 + High
gga-mir-2954 MI0013634 2530 Z 71305174 71305241 + Medium
tgu-mir-219b MI0013651 None chr17 5454921 5455078 - -
tgu-mir-2954 MI0013660 None chrZ 31606464 31606535 + -
tgu-mir-2976-1 MI0013672 None chr28 2245990 2246120 - -
tgu-mir-2976-3 MI0013673 None chr4A 19890709 19890854 + -
tgu-mir-2976-2 MI0013674 None chr1 113831865 113831974 + -
tgu-mir-2985-1 MI0013683 None chr4 29313507 29313589 + -
tgu-mir-2985-2 MI0013684 None chr1 75574420 75574500 - -
tgu-mir-129-1 MI0013688 None chr5 19791223 19791305 + -
tgu-mir-9-2 MI0013691 None chrZ 12103943 12104015 - -
tgu-mir-9-1 MI0013692 None chr10 12969737 12969809 - -
tgu-mir-124-1 MI0013698 None chr2 120492455 120492565 + -
tgu-mir-124-2 MI0013699 None chr3 111968090 111968160 + -
tgu-mir-124-3 MI0013700 None chr20 9826516 9826646 - -
tgu-let-7a-1 MI0013722 None chr1A 61564945 61565036 - -
tgu-let-7a-3 MI0013723 None chr12 772013 772103 + -
tgu-let-7a-2 MI0013724 None chr24 3137431 3137522 - -
tgu-let-7a-4 MI0013725 None chr26 532798 532889 - -
tgu-let-7f MI0013743 None chr12 772417 772508 + -
tgu-mir-29a-1 MI0013745 None chr1A 2716218 2716288 + -
tgu-mir-29a-2 MI0013746 None chr26 3761359 3761429 + -
tgu-mir-219a MI0013789 None chr17 5454954 5455025 + -
tgu-mir-92-1 MI0013800 None chr1 43202366 43202437 - -
tgu-mir-92-2 MI0013801 None chr4A 7274404 7274495 + -
gga-mir-219b MI0015382 721 17 5623153 5623241 - Medium
hsa-mir-219b MI0017299 21 chr9 128392621 128392708 + High
gga-mir-124c MI0022364 5 2 114006641 114006741 - -
gga-mir-9-3 MI0029331 54878 10 12947206 12947291 - High
gga-mir-92-2 MI0029335 1214 4 3923873 3923953 - High
gga-mir-9-4 MI0039523 54840 25 941514 941599 + High
gga-mir-2985-1 MI0040664 1 4 15716170 15716221 - Medium
gga-mir-9b-1 MI0040667 1 10 12947221 12947277 + High
gga-mir-132a MI0040692 1264 19 6000439 6000497 - High
gga-mir-132b MI0040693 1 19 6000441 6000499 + High
gga-mir-132c MI0040695 13 19 6001005 6001070 + High
gga-mir-2985-2 MI0040739 1 4 20951005 20951059 + High
gga-mir-129-1 MI0040749 2790 5 21051944 21052009 + High
gga-mir-129-2 MI0040764 2632 AADN04013943.1 1738 1801 - High
gga-mir-129-3 MI0040768 2632 AADN04016542.1 2343 2406 + High
gga-mir-9b-2 MI0040777 1 Z 61287846 61287900 - High



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