Stem-loop gga-mir-9b-1

Accession

MI0040667

Description

Gallus gallus gga-mir-9b-1 precursor miRNA

Literature search

19 open access papers mention gga-mir-9b-1
(347 sentences)

Sequence

125189 reads, 1 reads per million, 5 experiments

UUCGGUUAUCUAGCUUUAUGAuggcuccacaacacucAUACAGCUAGAUAACCAAAG
...((((((((((((.(((((((.........)).))))).))))))))))))....

Structure

-UUC            U     -  gcu 
    GGUUAUCUAGCU UAUGA ug   c
    |||||||||||| ||||| ||   c
    CCAAUAGAUCGA AUAcu ac   a
GAAA            C     c  aac 

Annotation confidence Not enough data

Genome context

chr10: 12934137-12934193 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-9b-1

Mature gga-miR-9b-5p

• Accession: MIMAT0049903
• Description: Gallus gallus gga-miR-9b-5p mature miRNA
• Sequence: 1 - UUCGGUUAUCUAGCUUUAUGA - 21
• Evidence: experimental ; Illumina [1]

Mature gga-miR-9b-3p

• Accession: MIMAT0049904
• Description: Gallus gallus gga-miR-9b-3p mature miRNA
• Sequence: 38 - AUACAGCUAGAUAACCAAAG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973