Stem-loop gga-mir-132c

Accession

MI0040695

Description

Gallus gallus gga-mir-132c precursor miRNA

Literature search

4 open access papers mention gga-mir-132c
(4 sentences)

Sequence

8569 reads, 6.0 reads per million, 202 experiments

agccaUGACUGUAGACUGUUACUGUccugucccuacgcagcAGUAAGCAGUCUAGAGCCAAGGugc
.(((.((.((.(((((((((((((..((((......)))))))).))))))))).)).)).)))..

Structure

-a   a  A  G         -    Uc    cc 
  gcc UG CU UAGACUGUU ACUG  cugu  c
  ||| || || ||||||||| ||||  ||||   
  uGG AC GA AUCUGACGA UGAc  gacg  u
cg   A  C  G         A    --    ca 

Annotation confidence High

Genome context

19: 6001005-6001070 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from gga-mir-132c

Mature gga-miR-132c-5p

• Accession: MIMAT0049956
• Description: Gallus gallus gga-miR-132c-5p mature miRNA
• Sequence: 6 - UGACUGUAGACUGUUACUGU - 25
• Evidence: experimental ; Illumina [1]

Mature gga-miR-132c-3p

• Accession: MIMAT0049957
• Description: Gallus gallus gga-miR-132c-3p mature miRNA
• Sequence: 42 - AGUAAGCAGUCUAGAGCCAAGG - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973