miRBase entry: tca-mir-3802

Stem-loop tca-mir-3802


Accession
MI0016256
Description
Tribolium castaneum tca-mir-3802 precursor miRNA


Sequence

cacuugauguaacuuuauacaaaaaucaacaaaaguauggcUUGCUUGAAUGACGAGAUAaaAUCGUUAUAUCGUAGUCGCCaucugucgcuacaauguuuuguuucauauauuuuuua
...((((((((......))))....))))....((.(((((..(((((((((((((.......))))))).))).))).)))))))...(..((((....))))..)............

Structure
cacuugauguaacuuuauacaaaaaucaacaaa  u     UU   -   -       GA 
                                 ag auggc  GCU UGA AUGACGA  U
                                 || |||||  ||| ||| |||||||  A
                                 uc uaCCG  UGA GCU UAUUGCU  a
auuuuuuauauacuuuguuuuguaacaucgcug  -     -C   U   A       Aa 


Annotation confidence Not enough data
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Genome context
ChLG10: 7113026-7113144 [+]

Database links

Mature tca-miR-3802-5p

Accession MIMAT0018620
Description Tribolium castaneum tca-miR-3802-5p mature miRNA
Sequence 42 - UUGCUUGAAUGACGAGAUA - 60
Evidence experimental
SOLID [1]

Mature tca-miR-3802-3p

Accession MIMAT0018621
Description Tribolium castaneum tca-miR-3802-3p mature miRNA
Sequence 63 - AUCGUUAUAUCGUAGUCGCC - 82
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696