Stem-loop tca-mir-3803

Accession

MI0016257

Description

Tribolium castaneum tca-mir-3803 precursor miRNA

Sequence

82 reads, 11.0 reads per million, 12 experiments

cacacgaggGAAUAUUAAAAAUGGAGGUAcauaacguucuguugcgccaaUAAUGUCCACCAUUGUAACUGGUGUCccucuucca
.....((((((.(((((..(((((.((.((((..(((......)))......)))))).))))).....))))))))))).....

Structure

cacac      A     ---AA     A  U    ----aa   uc 
     gaggGA UAUUA     AAUGG GG Acau      cgu  u
     |||||| |||||     ||||| || ||||      |||   
     cuccCU GUGGU     UUACC CC UGUA      gcg  g
accuu      -     CAAUG     A  -    AUaacc   uu 

Annotation confidence Not enough data

Genome context

ref|NC_007425.3|: 1682857-1682941 [+]

Mature tca-miR-3803-5p

• Accession: MIMAT0018622
• Description: Tribolium castaneum tca-miR-3803-5p mature miRNA
• Sequence: 10 - GAAUAUUAAAAAUGGAGGUA - 29
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3803-3p

• Accession: MIMAT0018623
• Description: Tribolium castaneum tca-miR-3803-3p mature miRNA
• Sequence: 51 - UAAUGUCCACCAUUGUAACUGGUGUC - 76
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696