Accession
MI0016277
Description
Tribolium castaneum
tca-mir-3818 precursor miRNA
Sequence
3884
reads,
38.0
reads per million, 32 experiments
agaaaugugcugcaaauuUUCCUUUCGUUCCAAUGAUGCUuuaaauuugaggaaCAUCUGCGGAGCUAAAGCGAAACuuuuuggcacaaauau
.....(((((((.(((.((((((((.(((((...(((((((((....)))))..))))...))))).)))).)))).))).))))))).....
.....(((((((.(((.((((((((.(((((...(((((((((....)))))..))))...))))).)))).)))).))).))))))).....
Structure
agaaa c u - C AAU -- a
ugugcug aaa uUUC CUUU GUUCC GAUG CUuua a
||||||| ||| |||| |||| ||||| |||| |||||
acacggu uuu AAAG GAAA CGAGG CUAC ggagu u
uauaa u C C U CGU aa u
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ref|NC_007416.3|: 6586616-6586708 [+]
Clustered miRNAs
22 other miRNAs are < 10 kb from tca-mir-3818
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature tca-miR-3818-5p
| Accession | MIMAT0018660 |
| Description | Tribolium castaneum tca-miR-3818-5p mature miRNA |
| Sequence | 19 - UUCCUUUCGUUCCAAUGAUGCU - 40 |
| Evidence |
experimental
SOLID [1] |
| Database links |
|
Mature tca-miR-3818-3p
| Accession | MIMAT0018661 |
| Description | Tribolium castaneum tca-miR-3818-3p mature miRNA |
| Sequence | 55 - CAUCUGCGGAGCUAAAGCGAAAC - 77 |
| Evidence |
experimental
SOLID [1] |
References
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