Stem-loop tca-mir-3830

Accession

MI0016292

Description

Tribolium castaneum tca-mir-3830 precursor miRNA

Sequence

gaagcguggugCUCGGUGCGGCACCGGCAUuaugguggaagacaaauauUUGGCCUCGGUCGCGUUGGgagccgccauu
.....(((((.(((((((((((...(((...(((.((.....))..)))...)))...))))))))))).)))))....

Structure

gaagc     g           ACC   AUu   -g  g 
     guggu CUCGGUGCGGC   GGC   aug  ug a
     ||||| |||||||||||   |||   |||  || a
     cgccg gGGUUGCGCUG   CCG   uau  ac g
-uuac     a           GCU   GUU   aa  a 

Annotation confidence Not enough data

Genome context

ChLGX: 3595260-3595338 [-]

Mature tca-miR-3830-5p

• Accession: MIMAT0018690
• Description: Tribolium castaneum tca-miR-3830-5p mature miRNA
• Sequence: 12 - CUCGGUGCGGCACCGGCAU - 30
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3830-3p

• Accession: MIMAT0018691
• Description: Tribolium castaneum tca-miR-3830-3p mature miRNA
• Sequence: 50 - UUGGCCUCGGUCGCGUUGG - 68
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696