Stem-loop tca-mir-3832

Accession

MI0016294

Description

Tribolium castaneum tca-mir-3832 precursor miRNA

Sequence

1346 reads, 131.0 reads per million, 32 experiments

uuagauuaacuggaguaaaacGGGCGAAAUGAUUCUGGUGUGUAGuuuuguccuauuucauaCACCAAAAUCGUUUCUCCUGUUUauuucaguuaagcacg
.....((((((((((((((.((((.(((((((((.(((((((((((........)))..)))))))).))))))))).)))))))))))))))))).....

Structure

uuaga              a    C         C        --   uuu 
     uuaacuggaguaaa cGGG GAAAUGAUU UGGUGUGU  AGu   g
     |||||||||||||| |||| ||||||||| ||||||||  |||    
     aauugacuuuaUUU GUCC CUUUGCUAA ACCACaua  uua   u
gcacg              -    U         A        cu   ucc 

Annotation confidence High

Genome context

ref|NC_007416.3|: 3536121-3536221 [-]

Mature tca-miR-3832-5p

• Accession: MIMAT0018694
• Description: Tribolium castaneum tca-miR-3832-5p mature miRNA
• Sequence: 22 - GGGCGAAAUGAUUCUGGUGUGUAG - 45
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3832-3p

• Accession: MIMAT0018695
• Description: Tribolium castaneum tca-miR-3832-3p mature miRNA
• Sequence: 63 - CACCAAAAUCGUUUCUCCUGUUU - 85
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696