Stem-loop tca-mir-3834

Accession

MI0016297

Description

Tribolium castaneum tca-mir-3834 precursor miRNA

Sequence

6794 reads, 201.0 reads per million, 34 experiments

ggauggaaUGAUGUUAUUUUCGACCUCcaccacccucucugguagAAAGUACGUCAUUCACCUC
((...(((((((((.((((((.(((...............))).))))))))))))))).))..

Structure

--  aug         U      G   UCcacc 
  gg   gaaUGAUGU AUUUUC ACC      a
  ||   ||||||||| |||||| |||      c
  CC   CUUACUGCA UGAAAg ugg      c
CU  --A         -      a   ucucuc 

Annotation confidence Medium

Genome context

ref|NC_007417.3|: 430410-430473 [+]

Mature tca-miR-3834-5p

• Accession: MIMAT0018700
• Description: Tribolium castaneum tca-miR-3834-5p mature miRNA
• Sequence: 9 - UGAUGUUAUUUUCGACCUC - 27
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3834-3p

• Accession: MIMAT0018701
• Description: Tribolium castaneum tca-miR-3834-3p mature miRNA
• Sequence: 46 - AAAGUACGUCAUUCACCUC - 64
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696