Stem-loop tca-mir-308

Accession

MI0016300

Description

Tribolium castaneum tca-mir-308 precursor miRNA

Sequence

ucaaaugggguaauuggcgcccugCGCAGGAUUUGCUUGUGAAUGGgugugcuugauucAAUCACAGGAAAAUUCUGUGCGgggaguugguuuugucaccaca
.....(((.(.(((((((.(((((((((((((((.(((((((.(((((.......))))).))))))).))))))))))))))).))))))).).))).....

Structure

ucaaa   g u       g               G       A     gu 
     ugg g aauuggc cccugCGCAGGAUUU CUUGUGA UGGgu  g
     ||| | ||||||| ||||||||||||||| ||||||| |||||  c
     acu u uugguug gggGCGUGUCUUAAA GGACACU Acuua  u
acacc   g u       a               A       A     gu 

Annotation confidence Not enough data

Genome context

ChLG2: 4378800-4378902 [-]

Mature tca-miR-308-5p

• Accession: MIMAT0018706
• Description: Tribolium castaneum tca-miR-308-5p mature miRNA
• Sequence: 25 - CGCAGGAUUUGCUUGUGAAUGG - 46
• Evidence: experimental ; SOLID [1]

Mature tca-miR-308-3p

• Accession: MIMAT0018707
• Description: Tribolium castaneum tca-miR-308-3p mature miRNA
• Sequence: 60 - AAUCACAGGAAAAUUCUGUGCG - 81
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696