Stem-loop tca-mir-3837

Accession

MI0016301

Description

Tribolium castaneum tca-mir-3837 precursor miRNA

Sequence

aaaAACAUUUGUCUAAUAAAUAAAUcuugagacguuuuuuuaaacuuguuaagacauuaugagcgagagugagauauugucggAAGAUUGUUUUUAUGAAAGugaacag
.....(((((.((....(((..((((((..((((...(((((..((((((...........))))))..)))))...))))..))))))..)))...))))))).....

Structure

aaaAA     G  UAAU   UA      ga    uuu     aa      aaga 
     CAUUU UC    AAA  AAUcuu  gacg   uuuua  cuuguu    c
     ||||| ||    |||  ||||||  ||||   |||||  ||||||    a
     guGAA AG    UUU  UUAGAA  cugu   agagu  gagcga    u
gacaa     -  -UAU   UG      gg    uau     ga      guau 

Annotation confidence Not enough data

Genome context

ChLG2: 2554348-2554456 [+]

Mature tca-miR-3837-5p

• Accession: MIMAT0018708
• Description: Tribolium castaneum tca-miR-3837-5p mature miRNA
• Sequence: 4 - AACAUUUGUCUAAUAAAUAAAU - 25
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3837-3p

• Accession: MIMAT0018709
• Description: Tribolium castaneum tca-miR-3837-3p mature miRNA
• Sequence: 84 - AAGAUUGUUUUUAUGAAAG - 102
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696