Accession
MI0016309
Description
Tribolium castaneum
tca-mir-3840 precursor miRNA
Sequence
8588
reads,
354.0
reads per million, 34 experiments
caucagugaaugcuuuguAGGGGGUACUGUAAGUACGUACGauuuuuuuaacgUAGUACGAACGGUACUCACUaugaacguuacacaguuu
.....(((((((.(((((((.(((((((((..((((.((((..........))))))))..))))))))).))))))))))).))).....
.....(((((((.(((((((.(((((((((..((((.((((..........))))))))..))))))))).))))))))))).))).....
Structure
cauca - c G AA G auuu
gug aaug uuuguAG GGGUACUGU GUAC UACG u
||| |||| ||||||| ||||||||| |||| ||||
cac uugc aaguaUC CUCAUGGCA CAUG AUgc u
uuuga a - A AG - aauu
Annotation confidence
High
Do you think this miRNA is real?
Genome context
ref|NC_007418.3|: 15689680-15689770 [+]
Clustered miRNAs
6 other miRNAs are < 10 kb from tca-mir-3840
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature tca-miR-3840-5p
| Accession | MIMAT0018724 |
| Description | Tribolium castaneum tca-miR-3840-5p mature miRNA |
| Sequence | 19 - AGGGGGUACUGUAAGUACGUACG - 41 |
| Evidence |
experimental
SOLID [1] |
| Database links |
|
Mature tca-miR-3840-3p
| Accession | MIMAT0018725 |
| Description | Tribolium castaneum tca-miR-3840-3p mature miRNA |
| Sequence | 54 - UAGUACGAACGGUACUCACU - 73 |
| Evidence |
experimental
SOLID [1] |
| Database links |
|
References
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