Stem-loop tca-mir-3847

Accession

MI0016318

Description

Tribolium castaneum tca-mir-3847 precursor miRNA

Sequence

gaagugcuguuuaaaUUCGAACUUUUUAUUUAAUUUggcaaugugugcgaguuacacguCUCGAAUUUCGAUCAGGUUcgauuuuaaccggcuuaaa
.....((((.(((((.((((((((.......(((((((..(((((((.....))))))).)))))))......)))))))).))))).)))).....

Structure

gaagu    u     U        UUUAUUU       ca       c 
     gcug uuaaa UCGAACUU       AAUUUgg  augugug g
     |||| ||||| ||||||||       |||||||  ||||||| a
     cggc aauuu agcUUGGA       UUAAGCU  ugcacau g
aaauu    c     u        -CUAGCU       -C       u 

Annotation confidence Not enough data

Genome context

ChLG3: 1617960-1618056 [-]

Mature tca-miR-3847-5p

• Accession: MIMAT0018742
• Description: Tribolium castaneum tca-miR-3847-5p mature miRNA
• Sequence: 16 - UUCGAACUUUUUAUUUAAUUU - 36
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3847-3p

• Accession: MIMAT0018743
• Description: Tribolium castaneum tca-miR-3847-3p mature miRNA
• Sequence: 60 - CUCGAAUUUCGAUCAGGUU - 78
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696