Stem-loop tca-mir-3849

Accession

MI0016323

Description

Tribolium castaneum tca-mir-3849 precursor miRNA

Sequence

guaacuguucgaaaugcUGACAUUUUAACCAUAGUGCUguuguuuauauucaaauuaauAGCAUUGUGUUGGAAAUGUCGUCuuuucgaacaaacua
.....(((((((((.(.(((((((((...((((((((((((((((......))).)))))))))))))...))))))))).).))))))))).....

Structure

guaac         u c         AAC             -   au 
     uguucgaaa g UGACAUUUU   CAUAGUGCUguug uuu  a
     ||||||||| | |||||||||   ||||||||||||| |||   
     acaagcuuu C GCUGUAAAG   GUGUUACGAuaau aaa  u
aucaa         u U         GUU             u   cu 

Annotation confidence Not enough data

Genome context

ChLG5: 5383152-5383248 [+]

Mature tca-miR-3849-5p

• Accession: MIMAT0018752
• Description: Tribolium castaneum tca-miR-3849-5p mature miRNA
• Sequence: 18 - UGACAUUUUAACCAUAGUGCU - 38
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3849-3p

• Accession: MIMAT0018753
• Description: Tribolium castaneum tca-miR-3849-3p mature miRNA
• Sequence: 60 - AGCAUUGUGUUGGAAAUGUCGUC - 82
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696