Stem-loop tca-mir-3852

Accession

MI0016327

Description

Tribolium castaneum tca-mir-3852 precursor miRNA

Sequence

cuccaugacgucacacucuuaauACGGGGCCUUUAAGGAGUucugcggcuUCUUCUGCGCCAUAAUUGUAuuaauaucgcggugacgcaacgac
.((..((.((((((....((((((((((((....((((((((....))))))))....)))....))))))))).......))))))))..)).

Structure

c  ca  a      ---acuc         ----   CUUU        c 
 uc  ug cgucac       uuaauACGG    GGC    AAGGAGUu u
 ||  || ||||||       |||||||||    |||    ||||||||  
 ag  ac gcagug       aauuAUGUU    CCG    UUCUucgg g
c  ca  -      gcgcuau         AAUA   CGUC        c 

Annotation confidence Not enough data

Genome context

ChLG5: 14767953-14768046 [-]

Mature tca-miR-3852-5p

• Accession: MIMAT0018760
• Description: Tribolium castaneum tca-miR-3852-5p mature miRNA
• Sequence: 24 - ACGGGGCCUUUAAGGAGU - 41
• Evidence: experimental ; SOLID [1]

Mature tca-miR-3852-3p

• Accession: MIMAT0018761
• Description: Tribolium castaneum tca-miR-3852-3p mature miRNA
• Sequence: 51 - UCUUCUGCGCCAUAAUUGUA - 70
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696